Competency-based training in bioinformatics

This article was written by Victoria Hill, Chemistry PhD student at the University of Sheffield.


Recently, EMBL-EBI, in collaboration with a number of our EU project partners, launched the Competency Hub. This is a free platform where students and professionals can evaluate their abilities against the competencies of that framework.

Competency Hub hero image
Competency Hub: Supporting competency-based training and professional development.

What is a competency?

A competency is an observable and measurable ability of any professional, specific to those required in your field. They’re further broken down into the Knowledge, Skills, and Attitudes (KSAs). 

The competencies are all mapped to career profiles ranging from PhD student to senior roles, both in industry and academia, and assigned a grade on a scale that measures the level the individual should be at in that competency depending on the profile. For a more in-depth analysis, the user can go into each graded competency and look at which KSAs are applicable at that career stage. 

An example of a competency within the BioExcel framework graded at ‘Awareness’ and the associated KSAs mapped to the career profile ‘PhD Student in Biomolecular Simulations’.
An example of a competency within the BioExcel framework graded at ‘Awareness’ and the associated KSAs mapped to the career profile ‘PhD Student in Biomolecular Simulations’.

What does the Competency Hub offer?

  • Evaluate your competencies against those of each framework by creating a  profile and comparing them to the pre-defined career profiles. 
  • Find training resources for each competency, and in some frameworks, more in-depth learning pathways for skills relevant to that field.
  • Develop courses as a trainer using the Competency Hub. Define your audience, plan your content, and write learning outcomes, as well as compare your resources to what is already available. 
  • Assess whether, as a trainer, you are targeting the correct audience and use the competencies to provide an overview to stakeholders.
  • Evaluate your team and create job descriptions as a manager.
Competency Hub Avatar
An example avatar

How did we do it?

After a pilot project with the BioExcel Knowledge Resource Centre, we decided to create a site where everybody can access all the information included in the competency framework. 

The Competency Hub was developed by the EMBL-EBI Training and Web Development teams in dedicated two-week collaborative development sprints. 

A goal was defined for each sprint; our most recent one focused on improving the career profile journeys. Previous sprints included making the site more user-friendly, adding learning pathway functionality, and adding career profiles, among other tasks to constantly improve the site.

What is next?

At the end of each sprint, we gain feedback from users to determine our next goals. The next sprint will focus on improving the connections between the competencies and the career profiles to the training resources.

Want to get involved with future development? Fill in our survey.


We’d love to hear what you think of this new feature! Tell us on Twitter using @EBItraining.

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Designing training using competencies

The European project team was initiated in the EMBL-EBI training team to build training frameworks on pan-European projects funded by the European Union’s Horizon 2020 programme.

Some of these projects include BioExcel, CINECA and EOSC Life, featuring EMBL-EBI as an active partner co-leading on training activities, secondments and best practices to deliver project goals. The training programme often includes a mix of face-to-face and remote courses, webinars and a range of online tutorials developed from a competency-based needs analysis.

Supporting biomolecular scientists

Competency mapper is an online tool developed by the EMBL-EBI training team using the BioExcel competency framework as a primary use case, to support professionals working in biomolecular sciences. Documenting competencies allows course providers to assess the effectiveness of their training model and obtain a better understanding of trainee needs.

Front page of the competency mapper website featuring projects
The new look of the competency mapper website

In the initial phase, the competency mapper was designed to map existing courses to identify significant gaps within training programmes. With its diverse potential, the tool has expanded into the area of career development where individual professionals can create profiles, document their competencies and seek further training to fill gaps in their portfolio.

In the future, learning pathways with curated sets of training resources will be added to achieve specific development goals. As this tool is currently in the early stages of development, the team are seeking feedback to improve and adapt to fit community needs.

If you have comments or suggestions, please contact the team at competency@ebi.ac.uk.

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